Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869493.1_cds_XP_016433769.1_29894
CDS Infomation

[gene=LOC107760260] [db_xref=GeneID:107760260] [protein=aspartyl protease family protein At5g10770-like] [protein_id=XP_016433769.1] [location=complement(join(8765..10029,10498..10663))] [gbkey=CDS]
Sequence

ATGTCTCTTTGGCCATATTCAACTTTTCTTCTTCTTTCTCTGCTGCTCACTTCCAGTAAT
GGCGCATTTGGCAATAACACAGCAAATGATGAGCTAATTCTTCAACTCAAAAGGCTTCAA
AGGACACAGCAGGGCAACAGCCAAAGTTGTTATTCCCAAAACTCAAGAAGTGAAAATGGA
GCAGTAATATTAGAAATGAAGCACAAAGATTACTGTTCTGGATCATCAACTGGTGACATG
AACAGAAAGATACAGAAACGGCTACTAGCTGATGATATTCGAGTTCGGTCAATACAAGCC
AACATTAAAAGAATCATTTCTGGAAAAGTGGAAGCTTTATCACAAACTCAAATTCCTATA
ACTTCCGGTGTCAAACTACATAGTCTAAATTACATTGTTACAGTAACATTAGGTGGTCGA
AATATGACAGTAATTGTAGACACAGGAAGTGATCTAACATGGGTTCAATGCCAACCTTGT
AGATTGTGTTACAATCAACCAGAACCTCTATTCAACCCTTCTGTTTCTCCTAATTATCAA
TCAGTTGCATGCAACTCAGCCGCGTGTCGATCTCTTCAATCTGCAACTGGAAATTCAGGA
TTATGTGGGAATGATTTAAAAAAATGTAATTATGTTGTTAGTTATGGAGATGGATCCTAC
ACTAAAGGTGAACTTGGTCAAGATCATTTGGTTCTTGGTAGCACTTCTGTTAACAATTTT
GTCTTTGGATGTGGCAGGAATAATAAAGGTCTGTTTGGTTTAGCTTCAGGACTTATGGGA
CTTGGAAAGAGTAATCTTTCTTTGATTTCTCAAACATTTGGAATTTTTGGTGATGTTTTC
TCTTATTGTTTGCCTTCAGTTGAAGCTAAGTCTGGCTCATTAGTATTAGGTGGTGACACT
TCAACTTTCAAGAATTCAACACCCATTTCTTACACTAAAATGGTTCCAAATCCACAGCTT
TTTAGCTTCTATTTTCTTAATCTAACCGGGACTAGTATCGGTGGGGTGGCTATTCAAGAT
TCAGCTTTTGGAAAATCTGGAATTATTATTGATTCTGGCACAGTTATCACAAGGCTTCCT
CCCGCTATTTACAAAGCTGTAAAAGCTGAGTTCTTGAAACAATTCTCGGGGTACCCTTTA
ACACAAGGATTTTCAATTCTTGACACTTGTTTTAATCTCTCTGCATATGAAGAAGTGAAC
ATTCCTACTATTAAAATGCAATTTGAGGGTGCTGTTGAGATGGAAGTTGATGTTACTGGG
GTTCTTTATTTTGTAAAGAGTGATGCATCACAGGTATGTTTGGCTTTGGCAAGCCTACAA
TATGAAGATGAGATTGGAATTATTGGAAATTATCAGCAGAAGAATACTAGGGTCATATAC
GACATAAAGCAGTCACGAGTTGGATTTGCAAAAGAGACATGCAACTTCTGA

Peptide Sequence

PEP ID

XP_016433769.1
PEP Infomation

PREDICTED: aspartyl protease family protein At5g10770-like [Nicotiana tabacum]
Sequence

MSLWPYSTFLLLSLLLTSSNGAFGNNTANDELILQLKRLQRTQQGNSQSCYSQNSRSENG
AVILEMKHKDYCSGSSTGDMNRKIQKRLLADDIRVRSIQANIKRIISGKVEALSQTQIPI
TSGVKLHSLNYIVTVTLGGRNMTVIVDTGSDLTWVQCQPCRLCYNQPEPLFNPSVSPNYQ
SVACNSAACRSLQSATGNSGLCGNDLKKCNYVVSYGDGSYTKGELGQDHLVLGSTSVNNF
VFGCGRNNKGLFGLASGLMGLGKSNLSLISQTFGIFGDVFSYCLPSVEAKSGSLVLGGDT
STFKNSTPISYTKMVPNPQLFSFYFLNLTGTSIGGVAIQDSAFGKSGIIIDSGTVITRLP
PAIYKAVKAEFLKQFSGYPLTQGFSILDTCFNLSAYEEVNIPTIKMQFEGAVEMEVDVTG
VLYFVKSDASQVCLALASLQYEDEIGIIGNYQQKNTRVIYDIKQSRVGFAKETCNF

Transcript Sequence

Gene sequence data has not been registered.